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Dion, P. et al. ed. Springer-Verlag 2008. * This volume provides a comprehensive coverage of the principal extreme soil ecosystems of natural and anthropogenic origin. Extreme soils oppose chemical or physical limits to colonization by most soil organisms and present the microbiologist with exciting opportunities. Extreme soils provide invaluable examples of microbial adaptations in coping with hostile habitats. Being home to a remarkable diversity, they are ideal models for scientific exploration and propose solutions to biotechnology and bioremediation challenges. * Heipieper, H. J. ed. Mehmetli, E. & Koumanova, B. ed. Springer-Verlag 2008. Hurst, C.J. ret al. ed. ASM Press 2007. Part I. Introduction to Environmental Microbiology: 1. Introduction to Environmental Microbiology/ 2. Neighborhoods and Community Involvement: No Microbe Is an Island/ 3. Prokaryotic Diversity: Form, Ecophysiology, and Habitat/ Part II. General Methodology: 4. Overview: General Methodology/ 5. Analytical Imaging and Microscopy Techniques/ 6. Cultivation of Bacteria and Fungi/ 7. Cultivation of Algae and Protozoa/ 8. Cultivation and Assay of Animal Viruses/ 9. Cultivation of Microbial Consortia and Communities/ 10. Lipid Analyses for Viable Microbial Biomass, Community Composition, Metabolic Status, and In Situ Metabolism/ 11. Physiological Profiling of Microbial Communities/ 12. Molecular Approaches for the Measurement of Density, Diversity, and Phylogeny/ 13. Phylogenetic and Genomic Analysis/ 14. Bioreporters, Biosensors, and Microprobes/ 15. Ecology at Long-Term Research Sites: Integrating Microbes and Ecosystems/ 16. Quality Assurance/ 17. Issues of Study Design and Statistical Analysis for Environmental Microbiology/ Part III. Water Microbiology in Public Health: 18. Overview of Water Microbiology as It Relates to Public Health/ 19. Waterborne Transmission of Infectious Agents/ 20. Detection of Microorganisms in Environmental Freshwaters and Drinking Waters/ 21. Detection of Protozoan Parasites in Source and Finished Drinking Water,/ 22. Microbial Indicators of Marine Recreational Water Quality/ 23. Detection of Viruses in Environmental Waters, Sewage, and Sewage Sludges/ 24. Detection of Bacterial Pathogens in Wastewater and Sludge/ 25. Detection of Pathogenic Bacteria, Viruses, and Parasitic Protozoa in Shellfish/ 26. Control of Microorganisms in Source Water and Drinking Water/ 27. Assessing the Efficiency of Wastewater Treatment/ 28. Modeling the Fate of Microorganisms in Water, Wastewater, and Soil/ 29. Estimating the Risk of Infectious Disease Associated with Pathogens in Drinking Water/ 30. Toxic Photosynthetic Microbes,/ Part IV. Aquatic Environments: 31. An Overview of Methodologies in Aquatic Microbial Ecology/ 32. Cultivating Microorganisms from Dilute Aquatic Environments/ 33. Primary Productivity and Producers/ 34. Bacterial Secondary Productivity/ 35. Community Structure: Bacteria and Archaea,/ 36. Viral Community Structure/ 37. Protistan Community Structure/ 38. Decomposition and Fungal Community Structure in Aquatic Environments/ 39. Bacterial Organic Carbon Cycling in Aquatic Environments/ 40. Environmental Genomics of C1 Metabolism/ 41. Sulfur Cycling/ 42. Nitrogen Cycling in Aquatic Environments/ 43. The Marine Phosphorus Cycle/ 44. Microbial Metal Cycling in Aquatic Environments/ 45. Biofilms on Living Surfaces/ 46. Extreme High-Pressure Marine Environments/ Part V.ﾊ Soil, Rhizosphere, and Phyllosphere: 47. Introduction and Overview: Soil, Rhizosphere, and Phyllosphere/ 48. Surface Soil Microbial Sampling Methods/ 49. Application of Phylogenetic Techniques in Studies of Soil Microbial Communities/ 50. Sampling Viruses from Soil/ 51. Isolation, Culture, and Detection of Arbuscular Mycorrhizal Fungi/ 52. Isolation, In Planta Detection, and Uses of Endophytic Bacteria for Plant Protection/ 53. Methods of Soil Microbial Community Analysis/ 54. Microarrays: Design and Use for Agricultural and Environmental Applications/ 55. PCR: Agricultural and Environmental Applications for Soil Microbes/ 56. Quantification of Nitrogen Transformations/ 57. Quantifying the Metabolic Activity of Soil- and Plant-Associated Microbes/ 58. Soil Enzymes: Linking Proteomics and Ecological Processes/ 59. Use of Immunofluorescence Microscopy and Fluorescence In Situ Hybridization Combined with CMEIAS and Other Image Analysis Tools To Study the Autecology of Soil- and Plant-Associated Microbes/ 60. Reporter Gene Systems Useful in Evaluating In Situ Gene Expression by Soil- and Plant-Associated Bacteria/ 61. Identifying Microorganisms Involved in Specific In Situ Functions/ 62. Mobile Gene Elements in Environmental Microbial Communities/ 63. Microorganisms Associated with Soil Arthropods/ 64. Lipid Fingerprinting of Soil Microbial Communities/ Part VI. Subsurface and Landfills: 65. Overview of Issues in Subsurface and Landfill Microbiology/ 66. Drilling, Coring, and Sampling Subsurface Environments/ 67. Anaerobic Decomposition of Refuse in Landfills and Methane Oxidation in Landfill Covers/ 68. Biogeochemistry of Aquifer Systems/ 69. Determining the Terminal Electron-Accepting Reaction in the Saturated Subsurface/ 70. Transport of Microorganisms in the Terrestrial Subsurface: In Situ and Laboratory Methods/ 71. Oil Field Microbiology/ 72. Placement of Drinking Water Wells and Their Protection/ Part VII. Aerobiology: 73. Introduction to Aerobiology/ 74. Sampling for Airborne Microorganisms/ 75. Analysis of Bioaerosol Samples/ 76. Fate and Transport of Microorganisms in Air,/ 77. Airborne Fungi and Mycotoxins/ 78. Airborne Bacteria and Endotoxin/ 79. Legionellae and Legionnairesﾕ Disease/ 80. Airborne Viruses/ 81. Aerobiology of Agricultural Pathogens/ Part VIII. Biotransformation and Biodegradation: 82. Overview: Biotransformation and Biodegradation/ 83. Functional Gene Arrays for Microbial Community Analysis/ 84. Methods for Soil Metagenomics: Extraction and Cloning of Soil DNA/ 85. Using Genetic Algorithms To Optimize Functions of Microbial Ecosystems/ 86. Metagenomic Methods for the Identification of Active Microorganisms and Genes in Biodegradation Processes/ 87. Proteomic Analysis of Extracellular Enzymes Produced by Wood-Degrading Fungi,/ 88. Current Progress in the Application of Mycoremediation to Soil Cleanup/ 89. Fungal Solid-State Fermentation Systems for Bioconversion of Lignocellulosic Biomass: Process Protocol and Applications/ 90. Characterization of Microeukaryota in Natural Environments/ 91. Methods Useful in Assessing Biological and Chemical Activity of Low-Molecular-Weight Brown Rot Fungal Metabolites/ 92. Techniques for Studying Uncultured and Cultured Magnetotactic Bacteria/ 93. Growth of Electrode-Reducing Bacteria/ 94. Microbially Mediated Anaerobic Iron (II) Oxidation at Circumneutral pH/ 95. Isolation, Enumeration, Growth, and Preservation of Acidophilic Prokaryotes/ 96. Molecular Techniques for the Study of Toxic Metal Resistance Mechanisms in Bacteria/ 97. Synchrotron-Based Techniques for Monitoring Metal Transformations/ 98. Techniques for Studying Microbial Transformations of Metals and Radionuclides/ 99. Arsenate-Respiring Bacteria/ 100. Biotransformations of Manganese/ 101. Microbial Fe (III) Reduction: Ecological and Physiological Considerations/ * Crompton, T.R. ed. Springer-Verlag 2006. * The presence of deliberately added or adventitious organic and inorganic compounds in soils can cause contamination of the crops which are grown on the land or animals feeding on the land, and, consequently can cause adverse toxic effects on man, animals, birds and insect life. Also, drainage of these substances from the soil by rainwater can cause pollution of adjacent streams, then rivers and, eventually, the oceans. The purpose of this book is to draw together the world-wide literature on the occurrence and analytical determination of all types of organic, organometallic and inorganic compounds in soils, animals, crops, plants, grains, dairy products and processed foods. Animal feed and fertilizers are also discussed. * Ibanez, J. G. et al. Springer-Verlag 2007.11 * Environmental Chemistry: Fundamentals, by Jorge Ibanez et al., is an exceptionally useful and well organized book. After reviewing basic chemical concepts, Environmental Chemistry: Fundamentals quickly progresses to more advanced and contemporary applications including ozone depletion, physiochemical and biological treatment of pollutants, and green chemistry. * |
